Press release
Researchers from Straubing in Down Under Two researchers from Straubing visit the Burnet Institute in Melbourne for a research trip. Full press release can be found here (in German).
New publication
We published a new article in Nature Scientific Reports: Riemenschneider M, Cashin KY, Budeus B, Sierra S, Shirvani-Dastgerdi E, Bayanolhag S, Kaiser R, Gorry PR, Heider D: Genotypic Prediction of Co-receptor Tropism of HIV-1 Subtypes A and C. Nature Scientific Reports 2016, 6:24883. (Link) Abstract Antiretroviral treatment of Human Immunodeficiency Virus type-1 (HIV-1) infections…
New publication
We published a new article in Current HIV Research: Riemenschneider M, Heider D: Current Approaches in Computational Drug Resistance Prediction in HIV. Current HIV Research 2016, in press. (Link) Abstract Today a broad range of antiretroviral drug regimens are applicable for the successful suppression of virus replication in human immunodeficiency virus (HIV) infected people.…
New publication
We published a new article in BioData Mining: Riemenschneider M, Senge R, Neumann U, Hüllermeier E, Heider D: Exploiting HIV-1 protease and reverse transcriptase cross-resistance information for improved drug resistance prediction by means of multi-label classification. BioData Mining 2016, 9:10. (Link) Abstract Background Antiretroviral therapy is essential for human immunodeficiency virus (HIV) infected patients…
New publication
We published a new article in Medicine: Baars T, Neumann U, Jinawy M, Hendricks S, Sowa JP, Kälsch J, Riemenschneider M, Gerken G, Erbel R, Heider D, Canbay A: In Acute Myocardial Infarction Liver Parameters Are Associated With Stenosis Diameter. Medicine 2016, 95(6):e2807. (Link) Abstract Detection of high-risk subjects in acute myocardial infarction (AMI) by…
New publication
We published a new article in ISME Journal: Grossmann L, Jensen M, Heider D, Jost S, Glücksman E, Hartikainen H, Mahamdallie SS, Gardner M, Hoffmann D, Bass D, Boenigk J: Protistan community analysis: key findings of a large-scale molecular sampling. ISME J. 2016, in press. (Link) Abstract Protists are perhaps the most lineage-rich of microbial…
New publication
We published a new article in Frontiers in Microbiology: Schmid J, Heider D, Wendel NJ, Sperl N, Sieber V: Bacterial Glycosyltransferases: Challenges and opportunities of a highly diverse enzyme class toward tailoring natural products. Front. Microbiol. 2016, 7:182. (Link) Abstract The enzyme subclass of glycosyltransferases (EC 2.4) currently comprises 97 families as specified by CAZy…
New publication
We published a new article in PLoS ONE: Lange A, Jost S, Heider D, Bock C, Budeus B, Schilling E, Strittmatter A, Boenigk J, Hoffmann D. AmpliconDuo: A Split-Sample Filtering Protocol for High-Throughput Amplicon Sequencing of Microbial Communities. PLoS ONE 2015, 10(11): e0141590. (Link) Abstract High throughput sequencing (HTSeq) of small ribosomal subunit amplicons…
Splitting a comma separated string into individual rows
Today I got the problem that I my data looks like this: col1 col2 col3 A B a,b,c C D c,d,e but I wanted to have something like that: col1 col2 col3 A B a A B b A B c C D c C D d C D e Using awk was the fastest…
Poster prize of GCB 2015
Ulla won the poster prize of the GCB 2015 in Dortmund! Congratulations! Her are some impressions from the GCB 2015 in Dortmund