We published a new article in PLoS ONE: Lange A, Jost S, Heider D, Bock C, Budeus B, Schilling E, Strittmatter A, Boenigk J, Hoffmann D. AmpliconDuo: A Split-Sample Filtering Protocol for High-Throughput Amplicon Sequencing of Microbial Communities. PLoS ONE 2015, 10(11): e0141590. (Link) Abstract High throughput sequencing (HTSeq) of small ribosomal subunit amplicons…
Today I got the problem that I my data looks like this: col1 col2 col3 A B a,b,c C D c,d,e but I wanted to have something like that: col1 col2 col3 A B a A B b A B c C D c C D d C D e Using awk was the fastest…
Ulla won the poster prize of the GCB 2015 in Dortmund! Congratulations! Her are some impressions from the GCB 2015 in Dortmund
We published a new article in Nature Scientific Reports: Kälsch J, Bechmann LP, Heider D, Best J, Manka P, Kälsch H, Sowa JP, Moebus S, Slomiany U, Jöckel KH, Erbel R, Gerken G, Canbay A. Normal liver enzymes are correlated with severity of metabolic syndrome in a large population based cohort. Nature Scientific Reports 2015,…
Two poster abstracts of the Bioinformatics group have been accepted at the GCB 2015: Riemenschneider et al.: SHIVA – A web application for drug resistance testing. Neumann et al.: Comparison of variable importance measures from random forest algorithms on strongly unbalanced data. Looking forward to Dortmund!
Our group recently started a research collaboration with the Burnet Institute in Melbourne, Australia. This collaboration is supported by the Bavarian Research Alliance (BayIntAn_HSWT_2015_87). Please find some impressions from our stay in Melbourne.
Some impressions from the ISMB / ECCB 2015 in Dublin
Some impressions from our BIT and BNR BBQ!
We launched our crowdfunding project Heart Guard DX! Please support our project (financially, and by broadcasting the url via facebook, twitter, etc.)
Few days ago I’ve started developing a web application for analyses of metatranscriptome data. One really fantastic thing that helped me to quickly get a general idea of the user interface layout and design was the online tool moqups. It’s ideal to create GUI drafts especially for web based apps and it’s definitely better than…
