New publication!

Our new article has been accepted in NAR Genomics and Bioinformatics: Philipps-Universität Marburg Park Y, Hauschild AC, Heider D: Transfer learning compensates limited data, batch effects and technological heterogeneity in single-cell sequencing. NAR Genomics and Bioinformatics 2021, 3(4):lqab104. (Link) Abstract Tremendous advances in next-generation sequencing technology have enabled the accumulation of large amounts of omics…

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CSBJ

New publication!

Our new article has been accepted in Computational and Structural Biotechnology Journal (CSBJ): Löchel HF, Heider D: Chaos Game Representation and its applications in Bioinformatics. Computational and Structural Biotechnology Journal 2021, Nov 10. (Link) Abstract Chaos game representation (CGR), a milestone in graphical bioinformatics, has become a powerful tool regarding alignment-free sequence comparison and feature…

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New publication!

Our new article has been published in BMC Medical Informatics and Decision Making: Gandouz M, Holzmann H, Heider D: Machine learning with asymmetric abstention for biomedical decision-making. BMC Medical Informatics and Decision Making 2021, 21:294. (Link) Abstract Machine learning and artificial intelligence have entered biomedical decision-making for diagnostics, prognostics, or therapy recommendations. However, these methods…

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New publication!

Our new article has been accepted in Bioinformatics: Ren Y, Chakraborty T, Doijad S, Falgenhauer L, Falgenhauer J, Goesmann A, Hauschild A-C, Schwengers O, Heider D: Prediction of antimicrobial resistance based on whole-genome sequencing and machine learning. Bioinformatics 2021, in press. (Link) Abstract MotivationAntimicrobial resistance (AMR) is one of the biggest global problems threatening human…

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CSBJ

New publication!

Our new article has been accepted in Computational and Structural Biotechnology Journal (CSBJ): Martin R, Dressler H, Hattab G, Hackl T, Fischer MG, Heider D: MOSGA 2: Comparative genomics and validation tools. Computational and Structural Biotechnology Journal. 2021 Sep 28. (Link) Abstract Due to the highly growing number of available genomic information, the need for…

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CSBJ

New publication!

Our new article has been accepted in Computational and Structural Biotechnology Journal (CSBJ): Anžel A, Heider D, Hattab G. The Visual Story of Data Storage: From Storage Properties to User Interfaces. Computational and Structural Biotechnology Journal. 2021 Aug 24. (Link) Abstract About fifty times more data has been created than there are stars in the…

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New publication!

Our new article has been accepted in Environment International: Spänig S, Eick L, Nuy JK, Beisser D, Ip M, Heider D*, Boenigk J*: A multi-omics study on quantifying antimicrobial resistance in European freshwater lakes. Environment International 2021, 157: 106821. *shared last & corresponding authors (Link) Abstract The surveillance of wastewater for the Covid-19 virus during…

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New publication!

Our new article has been accepted in JCPP Advances: Stroth S, Tauscher J, Wolff N, Küpper C, Poustka L, Roepke S, Roessner V, Heider D, Kamp‐Becker I: Identification of the most indicative and discriminative features from diagnostic instruments for children with autism. JCPP Advances 2021, 1(2): e12023. (Link) Abstract Background Diagnosing autism spectrum disorder (ASD)…

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New publication!

Our new article has been accepted in iScience: Hauschild AC, Eick L, Wienbeck J, Heider D: Fostering reproducibility, reusability, and technology transfer in health informatics. iScience 2021, 24(7): 102803. (Link) Summary Computational methods can transform healthcare. In particular, health informatics with artificial intelligence has shown tremendous potential when applied in various fields of medical research…

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