CATEGORY Publications

New publication!

Our new article has been accepted in Scientific Reports: Löchel HF, Heider D: Comparative analyses of error handling strategies for next-generation sequencing in precision medicine. Scientific Reports 2020, 10:5750. (Link) Abstract Next-generation sequencing (NGS) offers the opportunity to sequence millions and billions of DNA sequences in a short period, leading to novel applications in personalized…

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New publication!

Our new article has been accepted in Bioinformatics: Schwarz M, Welzel M, Kabdullayeva T, Becker A, Freisleben B, Heider D: MESA: automated assessment of synthetic DNA fragments and simulation of DNA synthesis, storage, sequencing, and PCR errors. Bioinformatics 2020, in press. (Link)   Abstract Summary The development of de novo DNA synthesis, PCR, DNA sequencing, and…

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New publication!

Our new article has been accepted in Scientific Data: Hackl T., Martin R., Barenhoff K., Duponchel S., Heider D., Fischer M.G.: Four high-quality draft genome assemblies of the marine heterotrophic nanoflagellate Cafeteria roenbergensis. Scientific Data 2020, 7:29 (Link)   Abstract The heterotrophic stramenopile Cafeteria roenbergensis is a globally distributed marine bacterivorous protist. This unicellular flagellate is…

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New publication!

Our new article has been accepted in Clinical Gastroenterology and Hepatology: Best J, Bechmann LP, Sowa LP, Sydor S, Dechêne A, Pflanz K, Bedreli S, Schotten C, Geier A, Berg T, Fischer J, Vogel A, Bantel H, Weinmann A, Schattenberg JM, Huber Y, Wege H, von Felden J, Schulze K, Bettinger D, Thimme R, Sinner…

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New publication!

Our new article has been accepted in Frontiers in Genetics: Martin R, Heider D: ContraDRG: Automatic partial charge prediction by Machine Learning, Frontiers in Genetics 2019, in press. (Link) Abstract In recent years, machine learning techniques have been widely used in biomedical research to predict unseen data based on models trained on experimentally derived data.…

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New publication!

Our new article has been accepted in Artificial Intelligence in Medicine: Spänig S, Emberger-Klein A, Sowa JP, Canbay A, Menrad K, Heider D: The Virtual Doctor: An Interactive Clinical-Decision-Support System based on Deep Learning for Non-Invasive Prediction of Diabetes, Artificial Intelligence in Medicine 2019, in press. (Link) Abstract Artificial intelligence (AI) will pave the way…

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New publication!

Our new article has been accepted in Liver Cancer: Schotten C, Bechmann LP, Manka P, Theysohn J, Dechêne A, El Fouly A, Barbato F, Neumann U, Radünz S,  Sydor S, Heider D, Venerito M, Canbay A, Gerken G, Herrmann K, Wedemeyer H, Best J: NAFLD-associated comorbidities in advanced stage HCC do not alter the safety…

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New publication!

Our new article has been accepted in Bioinformatics: Löchel HF, Eger D, Sperlea T, Heider D: Deep Learning on Chaos Game Representation for Proteins. Bioinformatics 2019, in press. Abstract Motivation: Classification of protein sequences is one big task in bioinformatics and has many applications. Different machine learning methods exist and are applied on these problems,…

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NETTAB/BBCC 2019

Dominik is member of the program commitee of the JOINT NETTAB/BBCC 2019 MEETING which will take place November 11-13, 2019 at the Fisciano Campus, University of Salerno, Italy http://www.nettab.org/2019/ https://www.bbcc-meetings.it/ DEADLINE FOR SUBMISSION OF ABSTRACTS FOR ORAL COMMUNICATIONS: Sunday June 30, 2019 TOPICS Oral presentations and posters are particularly encouraged for the usual topics of…

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